Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
241
total RNA-seq
Assay category
241
Transcription
Date released
64
May, 2021
43
May, 2020
25
February, 2020
24
February, 2021
24
July, 2019
16
August, 2021
12
February, 2023
12
October, 2019
8
March, 2020
5
December, 2019
5
January, 2019
2
July, 2018
1
February, 2018
Available data
219
tsv
193
bam
193
bigWig
8
fastq
4
txt
Organism
241
Homo sapiens
Biosample type
89
primary cell
70
in vitro differentiated cells
62
tissue
20
cell line
Organ
17
brain
17
connective tissue
17
epithelium
14
liver
14
pancreas
13
heart
11
kidney
10
embryo
8
adipose tissue
5
blood vessel
5
vasculature
4
artery
4
bone element
4
musculature of body
4
skeleton
3
limb
1
eye
1
nerve
1
pericardium
1
spinal cord
Project
168
AMP
73
T1D
Genome assembly (visualization)
193
GRCh38
193
hg19
Lab
166
AMP-T2D consortium
74
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
51
inconsistent ontology term
replication_type!
unreplicated
BIOSAMPLE
ASSAY
241 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
primary cell
monocyte
26
hepatocyte
5
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
+ See 36 more…
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
19
cardiomyocytes
12
induced pluripotent stem cell
9
neural progenitor cell
7
embryonic stem cell
5
+ See 16 more…
tissue
islet of Langerhans
10
heart
3
liver
3
subcutaneous adipose tissue
3
visceral abdominal adipose tissue
3
+ See 38 more…
cell line
H1-hESC
8
HepG2
5
EndoC_BH1
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
+ See 3 more…
See all biosamples
Download