Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 235single cell RNA-seq
Assay category
  • 235Transcription
Target of assay
  • 3control
Date released
  • 106August, 2021
  • 47September, 2023
  • 34May, 2022
  • 18September, 2020
  • 9April, 2020
  • 6February, 2021
  • 5April, 2018
  • 3December, 2019
  • 3July, 2019
  • 3May, 2023
  • 1February, 2023
Available data
  • 211tsv
  • fastq
  • 106bam
  • 106bigWig
  • 52zippedFastqFolder
  • 13txt
  • 8csv
Organism
  • 235Homo sapiens
Biosample type
  • 174tissue
  • 59primary cell
  • 2in vitro differentiated cells
Organ
  • 93heart
  • 64kidney
  • 9lung
  • 6blood vessel
  • 6vasculature
  • 5pancreas
  • 4epithelium
  • 3brain
  • 2artery
  • 1connective tissue
  • 1liver
  • 1musculature of body
Project
  • 128AMP
  • 51HPAP
  • 47KPMP
  • 9LungMap
Genome assembly (visualization)
  • 8GRCh38
  • 8hg19
Lab
  • 117AMP-T2D consortium
  • 51Klaus Kaestner, Upenn
  • 47KPMP
  • 11Katalin Susztak, Upenn
  • 9Xin Sun, UCSD
Audit category:
  • 7audit script error
  • 2inconsistent ontology term
files.file_type!
  • fastq
BIOSAMPLE
ASSAY

235 results

search-icontable-tab-icon
Clear Filters
single cell RNA-seq
tissue
kidney64
heart left ventricle18
left cardiac atrium18
right cardiac atrium18
heart right ventricle17
primary cell
Langerhans cell51
pancreatic acinar cell3
cerebellar granule cell2
Purkinje cell1
pancreatic ductal cell1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego