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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 346single cell RNA-seq
Assay category
  • 346Transcription
Target of assay
  • 3control
Date released
  • 106August, 2021
  • 49April, 2018
  • 47July, 2018
  • 47September, 2023
  • 34May, 2022
  • 18February, 2021
  • 18September, 2020
  • 9April, 2020
  • 3August, 2018
  • 3December, 2019
  • 3July, 2019
  • 3June, 2018
  • 3May, 2023
  • 1February, 2023
  • 1November, 2018
  • 1September, 2018
Available data
  • 210tsv
  • 111fastq
  • 105bam
  • 105bigWig
  • 51zippedFastqFolder
  • 13txt
  • 8csv
Organism
  • 346Homo sapiens
Biosample type
  • 180tissue
  • 164primary cell
  • 2in vitro differentiated cells
Organ
  • 93heart
  • 79pancreas
  • 69epithelium
  • 64kidney
  • 9lung
  • 6blood vessel
  • 6vasculature
  • 4connective tissue
  • 3brain
  • 2artery
  • 1liver
  • 1musculature of body
Project
  • 227AMP
  • 63HPAP
  • 47KPMP
  • 9LungMap
Genome assembly (visualization)
  • 105GRCh38
  • 105hg19
Lab
  • 216AMP-T2D consortium
  • 63Klaus Kaestner, Upenn
  • 47KPMP
  • 11Katalin Susztak, Upenn
  • 9Xin Sun, UCSD
Audit category:
  • 9inconsistent ontology term
  • 7audit script error
files.platform.term_name!
  • Illumina HiSeq 4000
BIOSAMPLE
ASSAY

346 results

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Clear Filters
single cell RNA-seq
tissue
kidney64
heart left ventricle18
left cardiac atrium18
right cardiac atrium18
heart right ventricle17
primary cell
Langerhans cell63
pancreatic acinar cell12
pancreatic beta cell12
pancreatic alpha cell11
pancreatic delta cell11
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
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