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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 333single cell RNA-seq
Assay category
  • 333Transcription
Target of assay
  • 3control
Date released
  • 106August, 2021
  • 47September, 2023
  • 40September, 2020
  • 37July, 2018
  • 34May, 2022
  • 26April, 2018
  • 18February, 2021
  • 9April, 2020
  • 3December, 2019
  • 3July, 2019
  • 3May, 2023
  • 2August, 2018
  • 2June, 2018
  • 1February, 2023
  • 1November, 2018
  • 1September, 2018
Available data
  • 175tsv
  • 98fastq
  • 70bam
  • 70bigWig
  • 52zippedFastqFolder
  • 13txt
  • 8csv
Organism
  • 333Homo sapiens
Biosample type
  • 174tissue
  • 157primary cell
  • 2in vitro differentiated cells
Organ
  • 93heart
  • 64kidney
  • 51pancreas
  • 46epithelium
  • 9lung
  • 6blood vessel
  • 6vasculature
  • 3brain
  • 3connective tissue
  • 2artery
  • 1liver
  • 1musculature of body
Project
  • 192AMP
  • 85HPAP
  • 47KPMP
  • 9LungMap
Genome assembly (visualization)
  • 70GRCh38
  • 70hg19
Lab
  • 181AMP-T2D consortium
  • 85Klaus Kaestner, Upenn
  • 47KPMP
  • 11Katalin Susztak, Upenn
  • 9Xin Sun, UCSD
Audit category:
  • 9inconsistent ontology term
  • 7audit script error
files.platform.term_name!
  • Illumina NextSeq 500
BIOSAMPLE
ASSAY

333 results

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Clear Filters
single cell RNA-seq
tissue
kidney64
heart left ventricle18
left cardiac atrium18
right cardiac atrium18
heart right ventricle17
primary cell
Langerhans cell85
pancreatic acinar cell8
pancreatic alpha cell8
pancreatic beta cell8
pancreatic delta cell7
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
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