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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 341single cell RNA-seq
Assay category
  • 341Transcription
Target of assay
  • 3control
Date released
  • 106August, 2021
  • 47September, 2023
  • 40July, 2018
  • 38September, 2020
  • 34May, 2022
  • 32April, 2018
  • 18February, 2021
  • 9April, 2020
  • 3August, 2018
  • 3December, 2019
  • 3July, 2019
  • 3May, 2023
  • 2June, 2018
  • 1February, 2023
  • 1November, 2018
  • 1September, 2018
Available data
  • 185tsv
  • 108fastq
  • 80bam
  • 80bigWig
  • 50zippedFastqFolder
  • 13txt
  • 8csv
Organism
  • 341Homo sapiens
Biosample type
  • 180tissue
  • 159primary cell
  • 2in vitro differentiated cells
Organ
  • 93heart
  • 64kidney
  • 62pancreas
  • 52epithelium
  • 9lung
  • 6blood vessel
  • 6vasculature
  • 4connective tissue
  • 3brain
  • 2artery
  • 1liver
  • 1musculature of body
Project
  • 202AMP
  • 83HPAP
  • 47KPMP
  • 9LungMap
Genome assembly (visualization)
  • 80GRCh38
  • 80hg19
Lab
  • 191AMP-T2D consortium
  • 83Klaus Kaestner, Upenn
  • 47KPMP
  • 11Katalin Susztak, Upenn
  • 9Xin Sun, UCSD
Audit category:
  • 9inconsistent ontology term
  • 7audit script error
files.read_length!
  • 100
BIOSAMPLE
ASSAY

341 results

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Clear Filters
single cell RNA-seq
tissue
kidney64
heart left ventricle18
left cardiac atrium18
right cardiac atrium18
heart right ventricle17
lung9
islet of Langerhans6
aorta4
aortic valve4
pulmonary valve4
tricuspid valve4
mitral valve3
cardiac atrium2
cardiac ventricle2
interventricular septum2
pulmonary artery2
heart1
liver1
skeletal muscle tissue1
primary cell
Langerhans cell83
pancreatic acinar cell11
pancreatic alpha cell8
pancreatic beta cell8
pancreatic delta cell8
pancreatic ductal cell7
pancreatic polypeptide-secreting cell6
pancreatic cell5
pancreatic stellate cell4
cerebellar granule cell2
co-expressing pancreatic endocrine cell2
endothelial cell2
enteroendocrine cell2
mast cell2
mesenchymal cell2
pancreatic epsilon cell2
unclassified exocrine cell2
unclassified pancreatic endocrine cell2
Purkinje cell1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
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