Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 316single cell RNA-seq
Assay category
  • 316Transcription
Target of assay
  • 3control
Date released
  • 106August, 2021
  • 47September, 2023
  • 34July, 2018
  • 34May, 2022
  • 31September, 2020
  • 22April, 2018
  • 18February, 2021
  • 9April, 2020
  • 3December, 2019
  • 3July, 2019
  • 3May, 2023
  • 2June, 2018
  • 1August, 2018
  • 1February, 2023
  • 1November, 2018
  • 1September, 2018
Available data
  • 167tsv
  • 90fastq
  • 62bam
  • 62bigWig
  • 43zippedFastqFolder
  • 13txt
  • 8csv
Organism
  • 316Homo sapiens
Biosample type
  • 174tissue
  • 140primary cell
  • 2in vitro differentiated cells
Organ
  • 93heart
  • 64kidney
  • 43pancreas
  • 38epithelium
  • 9lung
  • 6blood vessel
  • 6vasculature
  • 3brain
  • 3connective tissue
  • 2artery
  • 1liver
  • 1musculature of body
Project
  • 184AMP
  • 76HPAP
  • 47KPMP
  • 9LungMap
Genome assembly (visualization)
  • 62GRCh38
  • 62hg19
Lab
  • 173AMP-T2D consortium
  • 76Klaus Kaestner, Upenn
  • 47KPMP
  • 11Katalin Susztak, Upenn
  • 9Xin Sun, UCSD
Audit category:
  • 9inconsistent ontology term
  • 7audit script error
files.read_length!
  • 75
BIOSAMPLE
ASSAY

316 results

search-icontable-tab-icon
Clear Filters
single cell RNA-seq
tissue
kidney64
heart left ventricle18
left cardiac atrium18
right cardiac atrium18
heart right ventricle17
primary cell
Langerhans cell76
pancreatic acinar cell8
pancreatic alpha cell6
pancreatic beta cell6
pancreatic cell6
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego