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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 359single cell RNA-seq
Assay category
  • 359Transcription
Target of assay
  • 3control
Date released
  • 106August, 2021
  • 49April, 2018
  • 48July, 2018
  • 47September, 2023
  • 39September, 2020
  • 34May, 2022
  • 9April, 2020
  • 9February, 2021
  • 3August, 2018
  • 3December, 2019
  • 3July, 2019
  • 3June, 2018
  • 3May, 2023
  • 1February, 2023
  • 1November, 2018
  • 1September, 2018
Available data
  • 211tsv
  • 124fastq
  • 106bam
  • 106bigWig
  • 52zippedFastqFolder
  • 13txt
  • 8csv
Organism
  • 359Homo sapiens
Biosample type
  • 180tissue
  • 177primary cell
  • 2in vitro differentiated cells
Organ
  • 93heart
  • 80pancreas
  • 70epithelium
  • 64kidney
  • 9lung
  • 6blood vessel
  • 6vasculature
  • 4connective tissue
  • 3brain
  • 2artery
  • 1liver
  • 1musculature of body
Project
  • 228AMP
  • 75HPAP
  • 47KPMP
  • 9LungMap
Genome assembly (visualization)
  • 106GRCh38
  • 106hg19
Lab
  • 217AMP-T2D consortium
  • 75Klaus Kaestner, Upenn
  • 47KPMP
  • 11Katalin Susztak, Upenn
  • 9Xin Sun, UCSD
Audit category:
  • 9inconsistent ontology term
  • 7audit script error
files.read_length!
  • 91
BIOSAMPLE
ASSAY

359 results

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Clear Filters
single cell RNA-seq
tissue
kidney64
heart left ventricle18
left cardiac atrium18
right cardiac atrium18
heart right ventricle17
primary cell
Langerhans cell75
pancreatic acinar cell12
pancreatic alpha cell12
pancreatic beta cell12
pancreatic delta cell11
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
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