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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 299single cell RNA-seq
Assay category
  • 299Transcription
Target of assay
  • 3control
Date released
  • 106August, 2021
  • 47September, 2023
  • 40September, 2020
  • 34May, 2022
  • 18February, 2021
  • 16April, 2018
  • 15July, 2018
  • 9April, 2020
  • 3December, 2019
  • 3July, 2019
  • 3May, 2023
  • 2June, 2018
  • 1February, 2023
  • 1November, 2018
  • 1September, 2018
Available data
  • 141tsv
  • 68fastq
  • 52zippedFastqFolder
  • 36bam
  • 36bigWig
  • 13txt
  • 8csv
Organism
  • 299Homo sapiens
Biosample type
  • 180tissue
  • 117primary cell
  • 2in vitro differentiated cells
Organ
  • 93heart
  • 80pancreas
  • epithelium
  • 64kidney
  • 9lung
  • 6blood vessel
  • 6vasculature
  • 4connective tissue
  • 3brain
  • 2artery
  • 1liver
  • 1musculature of body
Project
  • 158AMP
  • 85HPAP
  • 47KPMP
  • 9LungMap
Genome assembly (visualization)
  • 36GRCh38
  • 36hg19
Lab
  • 147AMP-T2D consortium
  • 85Klaus Kaestner, Upenn
  • 47KPMP
  • 11Katalin Susztak, Upenn
  • 9Xin Sun, UCSD
Audit category:
  • 8inconsistent ontology term
  • 7audit script error
organ_slims!
  • epithelium
BIOSAMPLE
ASSAY

299 results

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Clear Filters
single cell RNA-seq
tissue
kidney64
heart left ventricle18
left cardiac atrium18
right cardiac atrium18
heart right ventricle17
primary cell
Langerhans cell85
pancreatic cell9
mesenchymal cell6
pancreatic stellate cell4
cerebellar granule cell2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
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