Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
DNase-seq
1
FAIRE-seq
1
pCHi-C
Assay category
17
DNA binding
3
DNA accessibility
Target of assay
15
histone
15
histone modification
9
broad histone mark
6
narrow histone mark
2
control
Date released
20
October, 2019
1
March, 2020
Available data
20
bam
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
hic
1
bedpe bed3+
1
tar
1
tsv
Organism
21
Homo sapiens
Biosample type
20
primary cell
1
tissue
Organ
787
pancreas
766
liver
659
connective tissue
485
adipose tissue
415
epithelium
343
heart
282
brain
278
kidney
187
vasculature
181
blood vessel
147
bone element
114
limb
96
artery
93
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
33
eye
24
spleen
20
lung
20
vein
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
21
AMP
Genome assembly (visualization)
15
hg19
12
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ATAC-seq
assay_title!!
ATAC-seq
files.file_type!
hic
BIOSAMPLE
ASSAY
21 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
pCHi-C
primary cell
endothelial cell of umbilical vein
17
2
1
tissue
bladder (urinary bladder)
1
Download