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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
total RNA-seq
18
snATAC-seq
ATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
81
Transcription
18
DNA accessibility
Date released
153
May, 2021
95
May, 2022
88
February, 2023
56
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
19
April, 2020
16
January, 2021
7
March, 2020
5
March, 2023
3
October, 2022
Available data
76
fastq
Organism
104
Homo sapiens
Biosample type
84
primary cell
15
tissue
5
cell line
Organ
52
pancreas
37
epithelium
8
blood
8
bodily fluid
Project
76
HPAP
28
T1D
AMP
Lab
76
Klaus Kaestner, Upenn
28
Kyle Gaulton, UCSD
assay_title!
ATAC-seq
award.project!
AMP
BIOSAMPLE
ASSAY
104 results
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total RNA-seq
snATAC-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
peripheral blood mononuclear cell
8
tissue
islet of Langerhans
5
6
pancreas
4
cell line
EndoC_BH1
3
2
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