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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
12
WGBS
8
Hi-C
ATAC-seq
2
FAIRE-seq
Assay category
27
DNA methylation
8
3D chromatin structure
2
DNA accessibility
Date released
187
June, 2019
126
February, 2021
123
May, 2022
98
February, 2023
77
August, 2021
56
September, 2020
47
September, 2023
37
July, 2019
34
October, 2019
27
May, 2021
21
August, 2017
19
April, 2020
18
November, 2018
16
January, 2021
14
March, 2020
11
November, 2020
5
January, 2018
5
March, 2023
4
July, 2018
4
May, 2023
4
October, 2022
2
May, 2020
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
December, 2019
1
March, 2019
1
September, 2018
Available data
79
bigWig
76
bam
tsv
23
bed bedMethyl
23
bigBed bedMethyl
4
bed bed3+
4
hdf5
2
bed narrowPeak
2
bigBed narrowPeak
Organism
37
Homo sapiens
Biosample type
24
tissue
13
primary cell
Organ
10
heart
8
epithelium
6
brain
6
musculature of body
5
kidney
5
limb
5
vasculature
4
blood vessel
3
liver
2
connective tissue
2
pancreas
1
eye
1
pericardium
Project
37
AMP
Genome assembly (visualization)
21
hg19
8
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
ATAC-seq
ChIP-seq
files.file_type!
tsv
BIOSAMPLE
ASSAY
37 results
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Clear Filters
RRBS
WGBS
Hi-C
FAIRE-seq
tissue
heart left ventricle
1
4
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
kidney
1
1
+ See 9 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 8 more…
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