Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
ATAC-seq
47
WGBS
6
MeRIP-seq
Assay category
53
Transcription
47
DNA methylation
Target of assay
3
control
3
nucleotide modification
Date released
41
May, 2022
37
February, 2023
16
September, 2020
6
February, 2021
6
November, 2020
Available data
59
fastq
41
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
hic
Organism
106
Homo sapiens
Biosample type
100
primary cell
6
cell line
Organ
134
pancreas
115
kidney
106
epithelium
50
liver
40
heart
19
lung
8
blood
8
bodily fluid
3
connective tissue
1
bone element
1
bone marrow
1
thymus
Project
100
HPAP
6
AMP
Lab
AMP-T2D consortium
100
Klaus Kaestner, Upenn
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
assay_title!
ATAC-seq
DNase-seq
files.file_type!
hic
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
106 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
WGBS
MeRIP-seq
primary cell
pancreatic alpha cell
42
31
pancreatic beta cell
11
16
cell line
EndoC_BH1
6
Download