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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
6
single cell RNA-seq
Hi-C
3
total RNA-seq
1
RRBS
1
pCHi-C
Assay category
9
Transcription
1
DNA methylation
Date released
6
August, 2021
3
February, 2020
1
July, 2019
1
March, 2020
Available data
bam
150
bigWig
87
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
11
bed bed3+
6
fastq
6
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
1
tar
Organism
11
Homo sapiens
Biosample type
10
tissue
1
primary cell
Organ
161
pancreas
144
heart
134
kidney
120
epithelium
89
bone element
86
liver
70
connective tissue
46
adipose tissue
38
brain
32
musculature of body
26
eye
20
lung
11
vasculature
10
blood vessel
8
blood
8
bodily fluid
5
gonad
5
ovary
4
artery
4
limb
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
11
AMP
Genome assembly (visualization)
1
hg19
Lab
11
AMP-T2D consortium
assay_title!
ATAC-seq
Hi-C
files.file_type!
bam
BIOSAMPLE
ASSAY
11 results
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Clear Filters
single cell RNA-seq
total RNA-seq
RRBS
pCHi-C
tissue
aorta
4
1
pulmonary artery
2
ascending aorta
1
coronary artery
1
tibial artery
1
primary cell
choroid plexus epithelial cell
1
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