Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
total RNA-seq
13
single cell RNA-seq
ATAC-seq
MPRA
1
snATAC-seq
Assay category
13
Transcription
1
DNA accessibility
Date released
89
February, 2021
8
August, 2021
1
May, 2022
Available data
1935
bam
1755
bigWig
1539
bed narrowPeak
1060
fastq
1015
bigBed narrowPeak
398
tagAlign
320
bed broadPeak
285
bigBed broadPeak
271
tsv
267
bed bed3+
114
zippedFastqFolder
98
txt
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
98
Homo sapiens
Biosample type
98
tissue
Organ
84
bone element
13
kidney
1
musculature of body
Project
98
AMP
Genome assembly (visualization)
1
hg19
Lab
90
AMP-T2D consortium
8
Katalin Susztak, Upenn
Audit category:
84
inconsistent ontology term
6
audit script error
assay_title!
ATAC-seq
MPRA
total RNA-seq
BIOSAMPLE
ASSAY
98 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
single cell RNA-seq
snATAC-seq
tissue
bone element
84
kidney
13
skeletal muscle tissue
1
Download