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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
5
total RNA-seq
ATAC-seq
2
Hi-C
Assay category
12
DNA binding
5
Transcription
2
3D chromatin structure
Target of assay
7
recombinant protein
7
transcription factor
3
control
2
histone
2
histone modification
2
narrow histone mark
Date released
74
May, 2021
44
February, 2021
26
June, 2019
19
October, 2019
15
March, 2020
15
November, 2019
6
July, 2018
6
November, 2020
4
December, 2017
4
May, 2020
3
August, 2021
3
May, 2019
2
December, 2019
2
February, 2023
2
July, 2019
1
February, 2020
1
June, 2018
Available data
17
bam
14
bigWig
9
bed narrowPeak
5
tsv
2
bedpe bed3+
2
hic
Organism
19
Homo sapiens
Biosample type
13
cell line
4
in vitro differentiated cells
2
tissue
Organ
13
kidney
2
brain
Project
19
AMP
Genome assembly (visualization)
16
hg19
14
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
1
audit script error
assay_title!
ATAC-seq
RNA microarray
small RNA-seq
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
total RNA-seq
Hi-C
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
1
cardiomyocytes (cardiac muscle cell)
1
1
tissue
brodmann area 43
1
insular gyrus
1
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