Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
28
ChIP-seq
20
total RNA-seq
2
Hi-C
Assay category
28
DNA binding
20
Transcription
2
3D chromatin structure
Target of assay
22
histone
22
histone modification
16
broad histone mark
6
narrow histone mark
5
control
1
RNA binding protein
1
transcription factor
Date released
693
February, 2021
406
November, 2017
August, 2017
365
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
218
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
94
December, 2017
88
November, 2018
87
July, 2019
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
41
bam
37
bigWig
20
tsv
17
bed narrowPeak
14
tagAlign
9
fastq
6
bigBed narrowPeak
3
bed broadPeak
2
bedpe bed3+
2
hic
Organism
50
Homo sapiens
Biosample type
35
tissue
15
cell line
Organ
35
pancreas
15
brain
15
epithelium
Project
50
AMP
Genome assembly (visualization)
39
hg19
37
GRCh38
Lab
50
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
Audit category:
4
missing controlled_by
assay_title!
ATAC-seq
RRBS
month_released!
August, 2017
BIOSAMPLE
ASSAY
50 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
1
brain
15
cell line
EndoC_BH1
13
1
1
Download