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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
ATAC-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
21
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
7
histone
7
histone modification
6
transcription factor
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
9
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
1
October, 2019
Available data
24
bam
23
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tagAlign
1
tsv
Organism
25
Homo sapiens
Biosample type
25
tissue
Organ
764
liver
712
pancreas
652
connective tissue
482
adipose tissue
351
epithelium
275
brain
252
heart
214
kidney
184
vasculature
178
blood vessel
147
bone element
114
limb
94
artery
92
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
33
eye
24
spleen
22
vein
18
ureter
11
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
25
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
25
AMP-T2D consortium
assay_title!
ATAC-seq
single cell RNA-seq
small RNA-seq
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
20
2
1
1
pituitary gland
1
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