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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
19
total RNA-seq
5
pCHi-C
3
DNase-seq
2
ChIP-seq
Assay category
19
Transcription
3
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
20
October, 2019
4
February, 2023
3
June, 2019
1
February, 2020
1
March, 2020
Available data
6
tsv
3
bam
3
bed bed3+
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Organism
29
Homo sapiens
Biosample type
29
tissue
5
primary cell
Organ
541
connective tissue
482
adipose tissue
437
pancreas
339
liver
261
brain
181
heart
160
kidney
146
bone element
114
limb
89
blood vessel
89
vasculature
80
musculature of body
42
nerve
34
artery
28
eye
24
spleen
18
ureter
11
lung
5
gonad
5
ovary
4
skeleton
3
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
29
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
29
AMP-T2D consortium
assay_title!
ATAC-seq
single cell RNA-seq
BIOSAMPLE
ASSAY
29 results
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total RNA-seq
pCHi-C
DNase-seq
ChIP-seq
tissue
islet of Langerhans
14
4
2
retina
3
3
pigmented layer of retina
2
small intestine
1
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