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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
20
total RNA-seq
11
ChIP-seq
2
Hi-C
Assay category
20
Transcription
11
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
control
1
RNA binding protein
1
transcription factor
Date released
672
February, 2021
356
August, 2017
356
May, 2021
335
November, 2017
253
October, 2019
218
May, 2020
June, 2019
125
August, 2021
120
July, 2018
101
February, 2023
99
July, 2019
97
May, 2019
89
May, 2022
81
November, 2018
73
December, 2017
66
April, 2019
60
March, 2020
58
September, 2018
47
October, 2018
40
May, 2024
33
November, 2019
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
16
January, 2021
16
September, 2020
12
October, 2017
10
April, 2020
10
November, 2020
7
December, 2019
5
January, 2018
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
1
March, 2019
1
May, 2023
Available data
31
bam
31
bigWig
20
tsv
11
bed narrowPeak
2
bedpe bed3+
2
hic
Organism
33
Homo sapiens
Biosample type
20
tissue
13
cell line
Organ
33
pancreas
13
epithelium
Project
33
AMP
Genome assembly (visualization)
33
hg19
31
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
assay_title!
ATAC-seq
single cell RNA-seq
month_released!
June, 2019
target.investigated_as!
control
BIOSAMPLE
ASSAY
33 results
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Clear Filters
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
1
cell line
EndoC_BH1
1
11
1
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