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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
17
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
18
Transcription
Date released
646
February, 2021
397
November, 2017
350
August, 2017
260
October, 2019
233
August, 2021
194
May, 2020
172
May, 2021
163
June, 2019
120
July, 2018
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
71
July, 2019
59
March, 2020
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
27
May, 2022
24
February, 2020
24
February, 2023
15
October, 2017
10
November, 2020
9
April, 2020
6
April, 2018
6
September, 2017
5
December, 2019
5
January, 2018
4
March, 2023
4
May, 2023
1
August, 2018
1
March, 2019
1
October, 2022
Available data
4
tsv
4
txt
Organism
23
Homo sapiens
Biosample type
primary cell
14
tissue
6
cell line
4
in vitro differentiated cells
Organ
6
pancreas
4
bone element
4
connective tissue
4
eye
4
skeleton
3
epithelium
1
heart
Project
14
AMP
10
T1D
Lab
14
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assay_title!
ATAC-seq
snATAC-seq
biosample_type!
primary cell
organ_slims!
spinal cord
BIOSAMPLE
ASSAY
24 results
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Clear Filters
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
tissue
islet of Langerhans
5
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
heart
1
+ See 3 more…
cell line
EndoC_BH1
3
2
1
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
See all biosamples
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