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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
10
total RNA-seq
1
GRO-seq
Assay category
13
DNA binding
10
Transcription
Target of assay
6
histone
6
histone modification
5
narrow histone mark
4
control
3
transcription factor
1
broad histone mark
Date released
13
December, 2017
February, 2018
8
August, 2021
2
May, 2021
1
January, 2018
Available data
23
bam
19
bigWig
14
fastq
10
tsv
8
bed narrowPeak
3
bed bed3+
Organism
24
Homo sapiens
Biosample type
16
in vitro differentiated cells
8
cell line
Organ
783
pancreas
768
liver
659
connective tissue
485
adipose tissue
421
epithelium
346
heart
282
brain
273
kidney
190
vasculature
184
blood vessel
147
bone element
114
limb
96
artery
94
musculature of body
blood
60
bodily fluid
42
nerve
33
eye
24
embryo
24
spleen
22
vein
18
ureter
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
24
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
1
hg18
Lab
24
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
assay_title!
ATAC-seq
snATAC-seq
month_released!
February, 2018
organ_slims!
blood
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
9
1
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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