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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
total RNA-seq
ATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
89
Transcription
Date released
212
August, 2021
162
August, 2017
143
February, 2021
126
November, 2017
123
May, 2022
91
October, 2019
90
February, 2023
85
May, 2021
56
September, 2020
47
September, 2023
42
March, 2020
34
May, 2020
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
June, 2019
5
December, 2018
5
December, 2019
5
January, 2018
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
May, 2023
1
August, 2018
1
August, 2022
1
March, 2019
1
September, 2018
Available data
76
fastq
4
tsv
4
txt
Organism
89
Homo sapiens
Biosample type
76
primary cell
9
tissue
4
in vitro differentiated cells
1
cell line
Organ
40
epithelium
38
pancreas
4
bone element
4
connective tissue
4
eye
4
skeleton
1
heart
Project
76
HPAP
14
AMP
T1D
Lab
76
Klaus Kaestner, Upenn
14
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
ATAC-seq
assembly!
GRCh38
award.project!
T1D
month_released!
July, 2019
BIOSAMPLE
ASSAY
90 results
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Clear Filters
total RNA-seq
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
heart
1
ilium
1
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in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
cell line
EndoC_BH1
1
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