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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
19
total RNA-seq
4
ChIP-seq
4
pCHi-C
1
RRBS
Assay category
19
Transcription
4
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
control
Date released
21
October, 2019
4
February, 2023
1
February, 2020
1
July, 2019
1
June, 2019
Available data
5
tsv
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
Organism
28
Homo sapiens
Biosample type
26
tissue
2
primary cell
Organ
240
liver
217
pancreas
161
epithelium
149
kidney
127
heart
98
connective tissue
89
bone element
67
brain
64
adipose tissue
45
vasculature
43
blood vessel
42
musculature of body
27
eye
26
limb
20
lung
14
blood
14
bodily fluid
13
artery
12
nerve
10
vein
9
spleen
8
embryo
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
28
AMP
Genome assembly (visualization)
7
hg19
GRCh38
Lab
28
AMP-T2D consortium
assay_title!
ATAC-seq
assembly!
GRCh38
month_released!
August, 2022
BIOSAMPLE
ASSAY
28 results
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total RNA-seq
ChIP-seq
pCHi-C
RRBS
tissue
islet of Langerhans
14
3
4
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
1
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