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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
ATAC-seq
23
DNase-seq
21
snATAC-seq
Assay category
52
Transcription
44
DNA accessibility
41
DNA methylation
Date released
95
May, 2022
23
June, 2019
19
September, 2020
Available data
390
bam
337
fastq
186
tsv
159
tagAlign
156
txt
141
bigWig
120
bed narrowPeak
114
zippedFastqFolder
79
bigBed narrowPeak
23
bed bed3+
23
bed broadPeak
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
137
Homo sapiens
Biosample type
121
primary cell
16
tissue
Organ
47
epithelium
43
pancreas
10
brain
7
kidney
3
heart
1
blood vessel
1
connective tissue
1
vasculature
Project
114
HPAP
23
AMP
Genome assembly (visualization)
258
GRCh38
hg19
Lab
114
Klaus Kaestner, Upenn
23
AMP-T2D consortium
assay_title!
ATAC-seq
assembly!
hg19
BIOSAMPLE
ASSAY
137 results
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single cell RNA-seq
WGBS
DNase-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
25
pancreatic beta cell
16
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 3 more…
tissue
body of pancreas
2
heart
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 9 more…
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