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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
16
ChIP-seq
ATAC-seq
1
DNase-seq
Assay category
19
Transcription
16
DNA binding
1
DNA accessibility
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
narrow histone mark
Date released
494
February, 2021
280
November, 2017
263
May, 2021
244
August, 2017
208
June, 2019
207
May, 2020
181
October, 2019
164
July, 2018
93
May, 2019
79
November, 2018
77
December, 2017
71
July, 2019
64
April, 2019
58
September, 2018
49
April, 2018
47
October, 2018
40
May, 2024
31
August, 2021
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
16
March, 2020
6
October, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
2
September, 2017
1
March, 2023
1
May, 2023
Available data
36
bam
36
bigWig
31
fastq
19
tsv
17
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
36
Homo sapiens
Biosample type
31
in vitro differentiated cells
5
primary cell
Organ
10
embryo
5
connective tissue
Project
36
AMP
Genome assembly (visualization)
36
GRCh38
36
hg19
Lab
36
AMP-T2D consortium
Audit category:
2
inconsistent control read length
assay_title!
ATAC-seq
organ_slims!
artery
large intestine
BIOSAMPLE
ASSAY
36 results
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Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
in vitro differentiated cells
pancreatic endoderm
4
6
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
posterior foregut
2
2
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primary cell
osteoblast
4
1
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