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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
396
total RNA-seq
13
ChIP-seq
ATAC-seq
3
small RNA-seq
Assay category
399
Transcription
13
DNA binding
Target of assay
12
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Date released
386
February, 2021
13
August, 2017
12
July, 2019
1
May, 2023
Available data
473
bigWig
472
bam
398
tsv
73
fastq
63
bed narrowPeak
bigBed narrowPeak
6
bed bed3+
3
bed broadPeak
2
bigBed broadPeak
1
tagAlign
Organism
412
Homo sapiens
Biosample type
410
tissue
2
primary cell
Organ
541
connective tissue
520
pancreas
412
adipose tissue
249
liver
225
epithelium
98
brain
85
heart
72
vasculature
70
blood vessel
58
artery
58
bone element
32
kidney
29
embryo
25
musculature of body
4
limb
4
nerve
4
vein
2
pericardium
1
eye
1
pituitary gland
0
blood
Project
412
AMP
Genome assembly (visualization)
413
GRCh38
412
hg19
Lab
412
AMP-T2D consortium
Audit category:
12
missing controlled_by
assay_title!
ATAC-seq
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
412 results
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total RNA-seq
ChIP-seq
small RNA-seq
tissue
adipose tissue
382
white adipose tissue
12
subcutaneous adipose tissue
6
1
omental fat pad
4
1
visceral abdominal adipose tissue
3
+ See 1 more…
primary cell
mesenchymal stem cell of adipose
1
1
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