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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
20
total RNA-seq
11
ChIP-seq
2
Hi-C
Assay category
20
Transcription
11
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
156
August, 2017
153
July, 2018
58
September, 2018
43
May, 2021
42
October, 2018
39
April, 2018
33
November, 2019
26
February, 2021
October, 2019
7
March, 2020
6
July, 2019
3
August, 2018
3
November, 2018
3
October, 2022
2
June, 2019
2
September, 2017
1
June, 2018
1
March, 2019
1
May, 2019
Available data
31
bam
31
bigWig
20
tsv
11
bed narrowPeak
2
bedpe bed3+
2
hic
Organism
33
Homo sapiens
Biosample type
20
tissue
13
cell line
Organ
33
pancreas
13
epithelium
Project
33
AMP
Genome assembly (visualization)
33
hg19
31
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
assay_title!
ATAC-seq
month_released!
October, 2019
BIOSAMPLE
ASSAY
33 results
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Clear Filters
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
1
cell line
EndoC_BH1
1
11
1
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