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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
Assay category
67
DNA binding
Target of assay
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
15
transcription factor
4
RNA binding protein
1
chromatin remodeller
Date released
693
February, 2021
406
August, 2017
406
November, 2017
365
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
218
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
July, 2019
88
November, 2018
80
April, 2019
76
October, 2018
67
December, 2017
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2019
34
December, 2018
30
January, 2019
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
67
bam
67
fastq
45
bed narrowPeak
45
bigWig
23
bigBed narrowPeak
15
bed bed3+
Organism
67
Homo sapiens
Biosample type
43
in vitro differentiated cells
21
tissue
3
stem cell
Organ
36
liver
19
epithelium
13
embryo
Project
67
AMP
Genome assembly (visualization)
50
GRCh38
50
hg19
Lab
67
AMP-T2D consortium
Audit category:
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
assay_title!
ATAC-seq
audit.ERROR.category!
inconsistent control
month_released!
February, 2020
July, 2019
BIOSAMPLE
ASSAY
67 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
tissue
liver
11
right lobe of liver
10
stem cell
hESC
3
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