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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
3
total RNA-seq
1
ChIP-seq
Assay category
4
3D chromatin structure
3
Transcription
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
4
July, 2019
3
February, 2020
1
October, 2019
Available data
bam
89
bigWig
84
bed narrowPeak
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
8
Homo sapiens
Biosample type
8
tissue
Organ
169
pancreas
147
heart
135
kidney
127
epithelium
90
liver
89
bone element
70
connective tissue
45
adipose tissue
41
brain
38
musculature of body
26
eye
19
lung
16
vasculature
15
blood vessel
8
blood
8
bodily fluid
8
limb
5
gonad
5
ovary
4
artery
4
skeleton
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
8
AMP
Lab
8
AMP-T2D consortium
assay_title!
ATAC-seq
audit.WARNING.category!
inconsistent control read length
files.file_type!
bam
BIOSAMPLE
ASSAY
8 results
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Clear Filters
Hi-C
total RNA-seq
ChIP-seq
tissue
gastrocnemius medialis
4
1
islet of Langerhans
1
tibial artery
1
tibial nerve
1
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