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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
ATAC-seq
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
42
Transcription
2
DNA accessibility
Date released
177
August, 2017
157
July, 2018
58
September, 2018
52
October, 2018
47
May, 2022
45
February, 2023
45
May, 2021
39
April, 2018
35
November, 2019
32
February, 2021
16
September, 2020
15
October, 2019
10
March, 2020
10
November, 2020
8
January, 2021
7
November, 2018
6
July, 2019
6
September, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
1
March, 2019
Available data
37
fastq
Organism
44
Homo sapiens
Biosample type
37
primary cell
7
tissue
1
cell line
Organ
45
pancreas
40
epithelium
4
bone element
4
connective tissue
4
eye
4
skeleton
1
heart
Project
37
HPAP
7
T1D
1
AMP
Lab
37
Klaus Kaestner, Upenn
7
Kyle Gaulton, UCSD
1
AMP-T2D consortium
assay_title!
ATAC-seq
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
45 results
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Clear Filters
total RNA-seq
snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
primary cell
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
2
cell line
EndoC_BH1
1
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