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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
6
WGBS
Assay category
98
Transcription
6
DNA methylation
Date released
51
May, 2021
45
May, 2020
6
February, 2021
2
March, 2020
Available data
186
bam
186
bigWig
159
fastq
114
zippedFastqFolder
104
tsv
88
bed narrowPeak
84
tagAlign
4
hic
bedpe bed3+
3
cool
Organism
104
Homo sapiens
Biosample type
102
primary cell
2
cell line
Organ
8
epithelium
8
pancreas
Project
AMP
98
T1D
6
HPAP
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
96
Kyle Gaulton, UCSD
6
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
assay_title!
ATAC-seq
award.project!
AMP
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
104 results
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total RNA-seq
WGBS
primary cell
monocyte
53
pancreatic alpha cell
6
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
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cell line
EndoC_BH1
2
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