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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
Assay category
91
DNA binding
Target of assay
923
histone modification
922
histone
508
transcription factor
468
narrow histone mark
453
broad histone mark
335
control
114
RNA binding protein
89
recombinant protein
36
chromatin remodeller
5
nucleotide modification
2
other context
2
other post-translational modification
Date released
68
November, 2017
16
November, 2018
7
October, 2019
Available data
91
bam
90
bed narrowPeak
90
bigWig
84
fastq
83
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
91
Homo sapiens
Biosample type
91
cell line
Organ
84
liver
7
kidney
spleen
Project
91
AMP
Genome assembly (visualization)
90
GRCh38
87
hg19
Lab
91
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
assay_title!
ATAC-seq
organ_slims!
spleen
BIOSAMPLE
ASSAY
91 results
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ChIP-seq
cell line
HepG2
84
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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