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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 92total RNA-seq
  • 85single cell RNA-seq
  • ATAC-seq
  • 48snATAC-seq
  • 47WGBS
  • 3Hi-C
Assay category
  • 177Transcription
  • 48DNA accessibility
  • 47DNA methylation
  • 33D chromatin structure
Date released
  • 95May, 2022
  • 76February, 2023
  • 56September, 2020
  • 45February, 2021
  • 3October, 2022
Available data
  • 159fastq
  • 114zippedFastqFolder
  • 6tsv
  • 3bedpe bed3+
  • 3cool
  • 3hic
Organism
  • 275Homo sapiens
Biosample type
  • 275primary cell
Organ
  • 103epithelium
  • 103pancreas
Project
  • 3821AMP
  • 275HPAP
  • 233T1D
  • 47KPMP
  • 19LungMap
  • 4community
  • 1ITG
Genome assembly (visualization)
  • 3hg19
Lab
  • 275Klaus Kaestner, Upenn
Audit category:
  • 30audit script error
assay_title!
  • ATAC-seq
BIOSAMPLE
ASSAY

275 results

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total RNA-seq
single cell RNA-seq
snATAC-seq
WGBS
Hi-C
primary cell
Langerhans cell8548
pancreatic alpha cell42311
exocrine cell39
pancreatic beta cell11161
pancreatic acinar cell1
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