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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
ATAC-seq
5
total RNA-seq
1
Capture-C
1
DNase-seq
Assay category
67
DNA binding
5
Transcription
1
DNA accessibility
Target of assay
37
histone
37
histone modification
22
transcription factor
20
broad histone mark
16
narrow histone mark
8
control
4
RNA binding protein
2
chromatin remodeller
Date released
68
August, 2017
4
February, 2021
1
August, 2021
1
February, 2023
Available data
58
bam
54
fastq
52
bigWig
43
bed narrowPeak
14
tagAlign
8
bed bed3+
4
tsv
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
74
Homo sapiens
Biosample type
74
in vitro differentiated cells
Organ
74
connective tissue
Project
74
AMP
Genome assembly (visualization)
54
hg19
53
GRCh38
Lab
73
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
total RNA-seq
Capture-C
DNase-seq
in vitro differentiated cells
adipocyte
67
5
1
1
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