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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 12single cell RNA-seq
  • ATAC-seq
  • 8ChIP-seq
  • 4total RNA-seq
  • 1Hi-C
Assay category
  • 16Transcription
  • 8DNA binding
  • 13D chromatin structure
Target of assay
  • 8histone
  • 8histone modification
  • 4broad histone mark
  • 4narrow histone mark
Date released
  • 10September, 2018
  • 6April, 2018
  • 5July, 2018
  • 2October, 2018
  • 1August, 2018
  • 1October, 2022
Available data
  • 24bam
  • 24bigWig
  • 21fastq
  • 16tsv
  • 8bed narrowPeak
  • 1bedpe bed3+
  • 1cool
  • 1hic
Organism
  • 25Homo sapiens
Biosample type
  • 25primary cell
Organ
  • 25epithelium
  • 25pancreas
Project
  • 24AMP
  • 1HPAP
Genome assembly (visualization)
  • 25hg19
  • 24GRCh38
Lab
  • 24AMP-T2D consortium
  • 1Klaus Kaestner, Upenn
Audit category:
  • 1audit script error
  • 1inconsistent ontology term
Audit category:
  • 8missing controlled_by
assay_title!
  • ATAC-seq
BIOSAMPLE
ASSAY

25 results

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single cell RNA-seq
ChIP-seq
total RNA-seq
Hi-C
primary cell
pancreatic acinar cell12841
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