Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
41
WGBS
34
single cell RNA-seq
22
snATAC-seq
20
total RNA-seq
Assay category
54
Transcription
41
DNA methylation
22
DNA accessibility
Date released
168
August, 2021
138
February, 2021
129
August, 2017
117
May, 2022
101
May, 2021
96
February, 2023
56
September, 2020
47
October, 2019
47
September, 2023
40
March, 2020
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
13
November, 2017
7
October, 2017
5
December, 2019
5
January, 2018
4
July, 2018
4
May, 2023
4
November, 2020
3
March, 2023
3
October, 2022
2
May, 2020
1
April, 2019
1
August, 2018
1
August, 2022
1
March, 2019
1
November, 2018
1
November, 2019
September, 2018
Available data
95
zippedFastqFolder
7
txt
bam
6
fastq
1
bed bed3+
Organism
117
Homo sapiens
Biosample type
95
primary cell
22
tissue
Organ
41
epithelium
41
pancreas
20
liver
2
musculature of body
Project
95
HPAP
22
AMP
Genome assembly (visualization)
1
hg19
Lab
95
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
2
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
ATAC-seq
biosample_type!
cell line
files.file_type!
bam
month_released!
September, 2018
BIOSAMPLE
ASSAY
117 results
search-icon
table-tab-icon
Clear Filters
WGBS
single cell RNA-seq
snATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
pancreatic beta cell
16
tissue
liver
20
skeletal muscle tissue
1
1
Download