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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
89
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
90
Transcription
2
DNA accessibility
Date released
671
February, 2021
406
November, 2017
338
August, 2017
287
October, 2019
241
May, 2020
238
May, 2021
218
June, 2019
211
August, 2021
168
July, 2018
123
May, 2022
120
May, 2019
102
July, 2019
98
February, 2023
88
November, 2018
80
April, 2019
76
October, 2018
59
September, 2018
56
September, 2020
51
December, 2017
49
April, 2018
47
September, 2023
44
March, 2020
40
May, 2024
35
December, 2018
33
November, 2019
30
January, 2019
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
8
December, 2019
6
September, 2017
5
March, 2023
4
May, 2023
3
August, 2018
3
June, 2018
1
August, 2022
1
January, 2018
1
March, 2019
1
October, 2022
Available data
76
fastq
4
tsv
4
txt
Organism
97
Homo sapiens
Biosample type
76
primary cell
16
tissue
6
cell line
in vitro differentiated cells
Organ
45
pancreas
40
epithelium
4
bone element
4
eye
4
skeleton
1
heart
Project
76
HPAP
12
T1D
10
AMP
Lab
76
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
10
AMP-T2D consortium
assay_title!
ATAC-seq
biosample_type!
in vitro differentiated cells
files.file_type!
bedpe bed3+
month_released!
February, 2020
BIOSAMPLE
ASSAY
98 results
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Clear Filters
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
2
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
heart
1
+ See 3 more…
cell line
EndoC_BH1
3
2
1
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