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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ChIP-seq
1
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
2
DNA binding
2
Transcription
1
DNA methylation
Target of assay
8
histone
histone modification
4
broad histone mark
4
narrow histone mark
2
control
Date released
3
July, 2019
2
June, 2019
Available data
5
bam
3
bigWig
2
tsv
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bed narrowPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
5
Homo sapiens
Biosample type
tissue
5
primary cell
Organ
391
liver
307
epithelium
271
pancreas
70
vasculature
67
blood
67
blood vessel
67
bodily fluid
67
heart
60
artery
56
connective tissue
35
kidney
24
embryo
10
brain
5
musculature of body
5
vein
3
adipose tissue
3
eye
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
5
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ATAC-seq
biosample_type!
tissue
files.file_type!
bed bed3+
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
RRBS
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
1
1
1
skeletal muscle cell
1
1
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