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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
ATAC-seq
21
snATAC-seq
Assay category
52
Transcription
41
DNA methylation
21
DNA accessibility
Date released
95
May, 2022
19
September, 2020
Available data
1374
bam
bigWig
949
fastq
763
bed narrowPeak
511
tsv
457
bigBed narrowPeak
160
tagAlign
114
zippedFastqFolder
109
bed broadPeak
109
bigBed broadPeak
64
bed bed3+
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
5
hdf5
4
tar
3
cool
2
csv
2
ibed
1
txt
1
vcf
Organism
114
Homo sapiens
Biosample type
114
primary cell
Organ
41
epithelium
41
pancreas
Project
114
HPAP
Lab
114
Klaus Kaestner, Upenn
assay_title!
ATAC-seq
biosample_type!
tissue
files.file_type!
bigWig
BIOSAMPLE
ASSAY
114 results
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single cell RNA-seq
WGBS
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
25
pancreatic beta cell
16
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