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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
291
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
291
DNA binding
89
Transcription
14
DNA methylation
3
DNA accessibility
Target of assay
213
histone modification
212
histone
129
broad histone mark
83
narrow histone mark
51
control
27
transcription factor
6
RNA binding protein
Date released
537
February, 2021
282
August, 2017
October, 2019
193
May, 2020
165
August, 2021
163
June, 2019
120
July, 2018
115
May, 2019
82
November, 2017
80
April, 2019
74
October, 2018
71
July, 2019
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
38
March, 2020
28
May, 2022
26
November, 2018
25
February, 2020
20
November, 2019
19
April, 2020
16
February, 2023
15
October, 2017
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
May, 2023
4
November, 2020
3
December, 2019
1
August, 2022
1
March, 2019
Available data
283
bam
269
bigWig
173
fastq
157
bed narrowPeak
113
bigBed narrowPeak
89
tsv
59
tagAlign
26
bed bed3+
26
bed broadPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
390
Homo sapiens
Biosample type
397
tissue
68
in vitro differentiated cells
61
primary cell
Organ
149
pancreas
56
adipose tissue
56
connective tissue
53
liver
50
blood vessel
50
vasculature
33
musculature of body
28
brain
21
heart
7
limb
5
artery
Project
397
AMP
Genome assembly (visualization)
271
hg19
248
GRCh38
Lab
397
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
assay_title!
ATAC-seq
month_released!
October, 2019
BIOSAMPLE
ASSAY
397 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
42
89
1
1
liver
48
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
ascending aorta
16
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