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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
Assay category
89
DNA binding
Target of assay
182
histone
182
histone modification
93
broad histone mark
89
narrow histone mark
29
control
17
transcription factor
6
RNA binding protein
5
nucleotide modification
Date released
36
August, 2017
23
October, 2019
15
May, 2024
9
November, 2017
2
August, 2021
2
May, 2021
1
April, 2019
1
October, 2017
Available data
390
bigWig
379
bed narrowPeak
bam
149
bigBed narrowPeak
134
tagAlign
110
fastq
29
bed broadPeak
14
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
89
Homo sapiens
Biosample type
81
tissue
4
in vitro differentiated cells
2
cell line
2
primary cell
Organ
16
connective tissue
16
heart
12
brain
11
adipose tissue
10
liver
7
musculature of body
6
pancreas
4
gonad
4
ovary
2
eye
1
limb
1
lymph node
Project
89
AMP
Genome assembly (visualization)
17
GRCh38
14
hg19
Lab
72
AMP-T2D consortium
Kyle Gaulton, UCSD
15
Patrick T. Ellinor, Broad
2
Bing Ren, UCSD
assay_title!
ATAC-seq
files.file_type!
bam
lab.title!
Kyle Gaulton, UCSD
month_released!
March, 2019
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
27
left cardiac atrium
15
subcutaneous abdominal adipose tissue
11
liver
8
skeletal muscle tissue
7
+ See 9 more…
in vitro differentiated cells
adipocyte
4
cell line
HepG2
2
primary cell
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
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