Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
ATAC-seq
29
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
29
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
transcription factor
1
RNA binding protein
Date released
54
February, 2021
23
October, 2019
4
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
Available data
87
bam
78
bigWig
58
tsv
24
bed narrowPeak
24
bigBed narrowPeak
4
bed bed3+
bed broadPeak
4
bigBed broadPeak
2
tagAlign
Organism
87
Homo sapiens
Biosample type
54
cell line
31
tissue
2
primary cell
Organ
756
pancreas
609
connective tissue
465
adipose tissue
411
liver
392
epithelium
299
heart
235
brain
kidney
166
vasculature
164
blood vessel
147
bone element
87
artery
78
limb
49
musculature of body
40
nerve
34
embryo
28
eye
20
lung
18
vein
17
blood
17
bodily fluid
17
spleen
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
87
AMP
Genome assembly (visualization)
74
GRCh38
74
hg19
Lab
87
AMP-T2D consortium
assay_title!
ATAC-seq
files.file_type!
bed broadPeak
organ_slims!
kidney
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
87 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
2
tissue
tibial artery
1
23
coronary artery
1
4
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download