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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
21
DNA binding
1
DNA accessibility
Target of assay
8
control
7
histone
7
histone modification
6
transcription factor
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
7
December, 2018
7
January, 2019
7
November, 2018
1
March, 2020
1
October, 2019
Available data
24
bam
23
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tagAlign
1
tsv
Organism
23
Homo sapiens
Biosample type
23
tissue
Organ
788
pancreas
765
liver
656
connective tissue
483
adipose tissue
415
epithelium
338
heart
280
brain
275
kidney
188
vasculature
183
blood vessel
147
bone element
113
limb
96
artery
91
musculature of body
68
blood
68
bodily fluid
nerve
37
embryo
32
eye
22
spleen
22
vein
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
23
AMP-T2D consortium
assay_title!
ATAC-seq
files.file_type!
bigBed bedMethyl
organ_slims!
nerve
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
DNase-seq
pCHi-C
tissue
spleen
20
1
1
pituitary gland
1
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