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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
19
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
19
Transcription
2
DNA binding
1
DNA methylation
Target of assay
3
histone
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
18
October, 2019
4
February, 2023
2
June, 2019
1
February, 2020
1
July, 2019
Available data
6
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
26
Homo sapiens
Biosample type
23
tissue
3
primary cell
Organ
633
pancreas
616
liver
571
connective tissue
450
adipose tissue
307
epithelium
219
heart
171
kidney
147
bone element
106
vasculature
104
blood vessel
72
artery
67
blood
67
bodily fluid
60
brain
29
limb
29
musculature of body
26
eye
25
embryo
20
lung
17
spleen
16
nerve
5
vein
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
26
AMP-T2D consortium
assay_title!
ATAC-seq
files.file_type!
bigBed broadPeak
month_released!
August, 2018
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
26 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
14
4
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
2
1
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