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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
8
snATAC-seq
ATAC-seq
2
WGBS
1
pCHi-C
Assay category
14
DNA binding
8
DNA accessibility
2
DNA methylation
Target of assay
14
control
Date released
8
January, 2021
8
November, 2018
4
December, 2018
4
January, 2019
1
March, 2020
Available data
83
bam
83
fastq
69
bigWig
67
bed narrowPeak
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
25
Homo sapiens
Biosample type
11
tissue
8
primary cell
6
cell line
Organ
725
pancreas
635
connective tissue
477
adipose tissue
411
liver
367
epithelium
252
heart
175
kidney
155
brain
147
bone element
107
vasculature
105
blood vessel
71
artery
48
musculature of body
37
embryo
30
limb
27
eye
20
lung
16
nerve
14
blood
14
bodily fluid
11
spleen
9
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
8
T1D
Genome assembly (visualization)
2
GRCh38
Lab
17
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assay_title!
ATAC-seq
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
25 results
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Clear Filters
ChIP-seq
snATAC-seq
WGBS
pCHi-C
tissue
spleen
8
2
1
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
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