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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
10
MeRIP-seq
ATAC-seq
Assay category
56
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
198
August, 2021
143
February, 2021
139
August, 2017
123
May, 2022
102
February, 2023
90
October, 2019
72
November, 2017
67
May, 2021
56
September, 2020
47
September, 2023
44
March, 2020
29
October, 2018
26
May, 2020
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
10
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
May, 2023
4
November, 2019
4
October, 2022
1
August, 2018
1
August, 2022
1
March, 2019
1
September, 2018
Available data
38
fastq
19
zippedFastqFolder
5
bam
bigWig
4
tsv
1
bed bed3+
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
66
Homo sapiens
Biosample type
56
primary cell
6
cell line
4
tissue
Organ
26
pancreas
22
epithelium
Project
56
HPAP
10
AMP
Lab
56
Klaus Kaestner, Upenn
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
assay_title!
ATAC-seq
files.file_type!
bigWig
target.investigated_as!
other context
BIOSAMPLE
ASSAY
66 results
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Clear Filters
single cell RNA-seq
total RNA-seq
MeRIP-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
pancreatic beta cell
1
cell line
EndoC_BH1
6
tissue
islet of Langerhans
4
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