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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
15
total RNA-seq
ATAC-seq
Assay category
30
DNA binding
15
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
1
RNA binding protein
Date released
550
February, 2021
334
November, 2017
298
May, 2021
267
August, 2017
215
May, 2020
210
June, 2019
202
October, 2019
164
July, 2018
97
May, 2019
80
November, 2018
79
July, 2019
72
December, 2017
65
April, 2019
58
September, 2018
49
April, 2018
47
October, 2018
45
August, 2021
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
18
March, 2020
6
October, 2017
5
December, 2019
5
January, 2018
5
November, 2020
3
August, 2018
3
June, 2018
Available data
123
tsv
57
txt
45
bigWig
39
bam
30
bed narrowPeak
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
0
ibed
0
tagAlign bed3+
Organism
45
Homo sapiens
Biosample type
22
cell line
20
in vitro differentiated cells
3
primary cell
Organ
17
liver
8
embryo
3
epithelium
Project
45
AMP
Genome assembly (visualization)
44
hg19
31
GRCh38
Lab
31
AMP-T2D consortium
14
Bing Ren, UCSD
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
14
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
13
7
primary cell
hepatocyte
3
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