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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
ATAC-seq
2
WGBS
1
DNase-seq
Assay category
66
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
57
transcription factor
10
RNA binding protein
10
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
30
December, 2018
21
January, 2019
18
November, 2018
Available data
83
bam
83
fastq
69
bigWig
67
bed narrowPeak
67
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
69
Homo sapiens
Biosample type
54
cell line
15
tissue
Organ
587
liver
582
pancreas
561
connective tissue
421
adipose tissue
267
epithelium
220
brain
180
heart
152
vasculature
147
blood vessel
131
kidney
89
limb
83
artery
67
musculature of body
58
bone element
54
blood
54
bodily fluid
30
nerve
29
embryo
18
ureter
15
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
69
AMP
Genome assembly (visualization)
69
GRCh38
67
hg19
Lab
69
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
WGBS
DNase-seq
cell line
GM12878
54
tissue
spleen
12
2
1
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