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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
16
small RNA-seq
8
WGBS
ATAC-seq
4
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
61
Transcription
8
DNA methylation
4
3D chromatin structure
2
DNA accessibility
Target of assay
3
control
Date released
524
February, 2021
334
November, 2017
255
May, 2021
215
May, 2020
206
June, 2019
194
October, 2019
111
August, 2017
96
May, 2019
75
July, 2019
73
November, 2018
72
December, 2017
65
April, 2019
45
August, 2021
40
May, 2024
31
February, 2018
30
December, 2018
26
January, 2019
11
July, 2018
10
April, 2018
10
March, 2020
6
October, 2017
5
December, 2019
5
January, 2018
5
November, 2020
5
October, 2018
2
June, 2018
Available data
75
bigWig
72
bam
61
tsv
21
bed bedMethyl
21
bigBed bedMethyl
4
bed bed3+
4
hdf5
2
bed narrowPeak
2
bigBed narrowPeak
Organism
75
Homo sapiens
Biosample type
53
tissue
22
primary cell
Organ
17
connective tissue
17
heart
15
brain
12
adipose tissue
8
blood vessel
8
liver
8
vasculature
7
epithelium
7
kidney
5
musculature of body
pancreas
2
artery
1
limb
1
pericardium
Project
75
AMP
Genome assembly (visualization)
69
GRCh38
67
hg19
Lab
75
AMP-T2D consortium
assay_title!
ATAC-seq
organ_slims!
pancreas
BIOSAMPLE
ASSAY
75 results
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total RNA-seq
small RNA-seq
WGBS
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
heart
2
1
1
heart left ventricle
2
2
right lobe of liver
2
2
+ See 18 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 14 more…
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