Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
ATAC-seq
21
snATAC-seq
Assay category
52
Transcription
41
DNA methylation
21
DNA accessibility
Date released
95
May, 2022
19
September, 2020
Available data
2874
bam
2670
bigWig
1413
tsv
1354
bed narrowPeak
1297
fastq
951
bigBed narrowPeak
320
bed broadPeak
308
tagAlign
285
bigBed broadPeak
267
bed bed3+
158
txt
114
zippedFastqFolder
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
114
Homo sapiens
Biosample type
114
primary cell
Organ
41
epithelium
41
pancreas
Project
114
HPAP
Lab
114
Klaus Kaestner, Upenn
assay_title!
ATAC-seq
month_released!
April, 2019
May, 2021
BIOSAMPLE
ASSAY
114 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
WGBS
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
25
pancreatic beta cell
16
Download